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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7918448 chr10:88910344 C/T FAM35B chr10:46897641-46939143:+ 0.35 6.87 1.97E-11 Box Plot
THCA rs7920891 chr10:120895131 A/C FAM45B chrX:129628939-129630562:+ -0.2 -5.96 5.0E-9 Box Plot
THCA rs7924311 chr11:49507573 G/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.23 1.0E-9 Box Plot
THCA rs7924371 chr11:49620595 C/T FOLH1B chr11:89372395-89431886:+ -0.34 -6.25 9.24E-10 Box Plot
THCA rs7924619 chr11:49620632 G/A FOLH1B chr11:89372395-89431886:+ -0.33 -5.98 4.44E-9 Box Plot
THCA rs7924992 chr11:48842647 G/C FOLH1B chr11:89372395-89431886:+ 0.44 6.42 3.37E-10 Box Plot
THCA rs7925289 chr11:77394600 G/A INTS4L1 chr7:64601603-64694600:+ 0.41 7.39 6.39E-13 Box Plot
THCA rs7925863 chr11:49615802 C/A FOLH1B chr11:89372395-89431886:+ -0.34 -6.3 6.56E-10 Box Plot
THCA rs7926002 chr11:49616018 A/G FOLH1B chr11:89372395-89431886:+ -0.35 -6.34 5.47E-10 Box Plot
THCA rs7926701 chr11:49006671 C/A FOLH1B chr11:89372395-89431886:+ 0.45 6.41 3.51E-10 Box Plot
THCA rs7927173 chr11:77255548 A/G INTS4L1 chr7:64601603-64694600:+ 0.46 7.17 2.95E-12 Box Plot
THCA rs79285481 chr12:25338808 T/A CSNK2A1P chr11:11373323-11374904:- -0.33 -6.17 1.43E-9 Box Plot
THCA rs7929313 chr11:77606217 G/A INTS4L1 chr7:64601603-64694600:+ 0.44 7.9 1.87E-14 Box Plot
THCA rs7930213 chr11:49115417 G/A FOLH1B chr11:89372395-89431886:+ 0.44 6.66 7.76E-11 Box Plot
THCA rs7933661 chr11:48578230 A/G FOLH1B chr11:89372395-89431886:+ 0.43 6.28 7.41E-10 Box Plot